Optimize User Experience

Here is how to ensure the best possible user experience.

• Start with metadata table to explore available samples
• Use filters to narrow down samples before selection
• Select up to 10-20 samples for most analyses

The Violin & Ternary Plots are slowest because they are transcript-level.

Here is how to optimize the Violin & Ternary Plots:

• Limit to 2-6 samples for fastest results
• Use “Merged” replicate mode when analyzing replicates
• Be patient: Progress may not be visible during computation
• Plots render sequentially, not in parallel

For Downloads

• Limit downloads to 4 samples to avoid timeouts
• Please use the Data Freeze (https://doi.org/10.48723/zchv-5x22) for larger downloads.
• Expect 30-90 seconds for download preparation